FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830346

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830346
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16634255
Sequences flagged as poor quality0
Sequence length70-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT363600.09.292423120
AGATCTC355050.08.97531120
GTGTAGA496850.08.587935120
GAGTGTA533600.08.525068120
AGAGTGT584450.08.52266120
GTAGATC484200.08.514839120
TCGGTGG284600.08.476872120
AGTGTAG499700.08.382827120
GATCTCG366600.08.348763120
TCTCGGT293600.08.319224120
CTCGGTG301100.08.151865120
AAGAGTG649000.08.091105120
GGTGGTC237800.08.075745120
GTGGTCG209950.08.060792120
TGGTCGC196300.07.673578120
TAGGGAA924050.07.5336766120
CGGTGGT289550.07.502905120
ATCTCGG334950.07.471375120
TGTAGAT539250.07.300593120
TGTAGGG1031000.07.2760525120
Produced by FastQC (version 0.11.5)