FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830352

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830352
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13181383
Sequences flagged as poor quality0
Sequence length126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC302450.09.243202120
GTGGTCG333150.08.931656120
GGTCGCC303600.08.733949120
GGTGGTC365300.08.671104120
CGGTGGT416400.08.428207120
CTCGGTG461350.08.348234120
TCGGTGG432950.08.341591120
CGTATCA205750.08.1641120
ATCTCGG525300.08.142772120
AGATCTC581100.07.9493203120
TAGATCT614150.07.81458120
TCTCGGT481050.07.769408120
GTGTAGA788800.07.6814747120
GATCTCG574700.07.5785403120
GTAGATC777300.07.470967120
CGCCGTA270300.07.45733120
GAGTGTA854450.07.4493585120
CCGTATC247300.07.4473953120
GTCGCCG340800.07.358119120
AGTGTAG810800.07.280673120
Produced by FastQC (version 0.11.5)