FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830356

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830356
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11924840
Sequences flagged as poor quality0
Sequence length71-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC197400.08.328029120
TAGATCT351450.08.160244120
GTGGTCG214200.08.151027120
GGTGGTC234500.07.6501007120
AGAGTGT521900.07.2770476120
AGATCTC356250.07.2082143120
GTAGATC444350.07.142813120
AGTGTAG451650.07.1336384120
ATCTCGG339350.07.0898223120
TCGGTGG275150.07.065035120
TCTCGGT314950.07.0294857120
CTCGGTG310600.06.9927163120
GTGTAGA450050.06.9723587120
CGGTGGT269200.06.886875120
TGTAGAT488250.06.6480427120
GGTCGCC204500.06.542599120
GAGTGTA482050.06.516445118-119
GATCTCG364200.06.516174118-119
CCGTATC185000.06.453869120
CGTATCA149350.06.3071513120
Produced by FastQC (version 0.11.5)