FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830370

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830370
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11264657
Sequences flagged as poor quality0
Sequence length55-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC271150.09.105335120
GTGGTCG295850.09.0355120
GCGTCGG71500.08.653562120
GGTCGCC266500.08.520368120
AGATCTC516450.08.316517120
GGTGGTC326400.08.281826120
TAGATCT529250.08.160781120
TCTCGGT421700.08.105362120
TCGGTGG389550.07.9107537120
AAAAAAA444300.07.814753120
CTCGGTG402300.07.7944274120
ATCTCGG457650.07.7049236120
GTCGCCG276850.07.529197120
GAGTGTA733300.07.5201197120
CGGTGGT377150.07.517814120
GTGTAGA670300.07.3934727120
GTAGATC680200.07.3476834120
AGTGTAG688000.07.2905746120
GATCTCG499550.07.287144120
CGCCGTA250500.07.266054120
Produced by FastQC (version 0.11.5)