FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830376

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830376
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12668109
Sequences flagged as poor quality0
Sequence length50-126
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA487900.010.956706120
GGTGGTC371000.08.279979120
TCGGTGG429200.07.9120646120
GGTCGCC312350.07.740993120
AGATCTC548600.07.546168120
TGGTCGC306950.07.544888120
GTGGTCG334750.07.4918456120
TAGATCT549550.07.304069118-119
TCTCGGT460400.07.2976975120
GATCTCG552650.07.1651764120
GAGTGTA748150.07.1613665120
CTCGGTG460750.07.1098495120
GCGTCGG91000.07.054651120
ATCTCGG497600.07.0535645120
GTGTAGA696300.06.9277587120
GTAGATC697800.06.758102120
CGGTGGT423100.06.700463118-119
TCATTAA173050.06.6914287120
AGAGTGT804450.06.690006120
TGTAGAT714250.06.6780553120
Produced by FastQC (version 0.11.5)