FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830384

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830384
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13774150
Sequences flagged as poor quality0
Sequence length56-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGGT441350.08.972218120
GCGTCGG67600.08.902466120
TAGATCT563400.08.82308120
GATCTCG519750.08.730394120
ATCTCGG485400.08.703508120
TCGGTGG397100.08.608064120
GTGGTCG306300.08.546717120
CTCGGTG415150.08.538219120
AGATCTC535100.08.35624120
GGTGGTC332700.08.121768120
GGTCGCC278550.07.9290276120
AGTGTAG755650.07.8685246120
GTGTAGA729950.07.8075347120
TGGTCGC281700.07.699261118-119
AAGAGTG955500.07.671382120
AGAGTGT871300.07.6598606120
GAGTGTA808950.07.6253395120
GTAGATC742150.07.3710475120
CGGTGGT387500.07.3614554120
GTCGCCG303600.07.175693120
Produced by FastQC (version 0.11.5)