FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830392

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830392
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12155454
Sequences flagged as poor quality0
Sequence length65-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT498800.09.128999120
TGGTCGC247900.09.075334120
GGTGGTC298900.08.91179120
TCTCGGT391100.08.8357315120
GTGGTCG269450.08.817081120
GGTCGCC256450.08.702581120
ATCTCGG433950.08.640685120
AGATCTC479500.08.545548120
GAGTGTA715050.08.440523120
AGTGTAG663050.08.396717120
CGGTGGT346350.08.383744120
GATCTCG480600.08.376192120
TCGGTGG350000.08.296313120
CTCGGTG373750.08.202525120
CGTATCA166400.08.11217120
GTGTAGA640000.07.883587120
TGTAGAT661300.07.611518120
AGAGTGT767000.07.555959118-119
GTAGATC650550.07.423745120
GCGTCGG91300.07.2281933120
Produced by FastQC (version 0.11.5)