FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830396

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830396
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14082929
Sequences flagged as poor quality0
Sequence length52-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT321100.09.604835120
AGTGTAG441750.09.399323120
GAGTGTA480400.09.030305120
GTGTAGA432850.08.774723120
AGATCTC313200.08.697635120
AGAGTGT525050.08.696631120
ATCTCGG288800.08.580645120
AAGAGTG588000.08.520719120
GATCTCG317200.08.323129120
GTAGATC440250.08.02755120
TAGGGAA849650.07.8105593120
GTAGGGA893650.07.741567120
GGTGGTC210900.07.6816454120
TCTCGGT264050.07.6806436120
TGTAGAT472550.07.6185193120
CTCGGTG256800.07.5703697120
TGTAGGG951500.07.5105205120
GCGTCGG90550.07.2890563120
GGGAAAG856600.07.221837120
TCGGTGG245150.07.220333120
Produced by FastQC (version 0.11.5)