FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830402

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830402
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13914451
Sequences flagged as poor quality0
Sequence length60-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT524050.09.654943120
TCGGTGG355350.09.520558120
GATCTCG511450.09.458082120
GAGTGTA798050.09.374533120
AGTGTAG733750.09.352513120
CGGTGGT339700.09.269282120
GTGGTCG269100.09.244789120
GTGTAGA699850.09.161568120
TGGTCGC247450.08.936567120
TCTCGGT417550.08.893862120
AGATCTC507800.08.839716120
CTCGGTG403150.08.838903120
GGTGGTC292650.08.706182120
GTAGATC690500.08.650338120
ATCTCGG460350.08.510788120
AGAGTGT867900.08.488503120
AAGAGTG955900.08.398551120
GCGTCGG101500.08.229229120
TGTAGAT729350.08.189564120
CGTATCA174800.07.6660876120
Produced by FastQC (version 0.11.5)