FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830408

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830408
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12646701
Sequences flagged as poor quality0
Sequence length65-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTC308250.09.216858120
GTGGTCG268900.09.113688120
TAGATCT495850.08.600681120
TCGGTGG363500.08.509963120
GATCTCG477600.08.476575120
CTCGGTG389950.08.44105120
TGGTCGC247150.08.408921120
AGATCTC485600.08.287451120
TGTAGAT662050.08.237964120
TCTCGGT400250.08.133787120
ATCTCGG434400.08.005962120
AGTGTAG668150.07.9829574120
GTGTAGA648850.07.8408647120
GGTCGCC250000.07.8325367120
GAGTGTA708550.07.773627120
GTAGATC630650.07.7623644120
AAAAAAA441700.07.5608773120
CGGTGGT363650.07.482375120
AGAGTGT764700.07.4070525120
GTCGCCG270200.07.202521120
Produced by FastQC (version 0.11.5)