FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830416

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830416
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14559435
Sequences flagged as poor quality0
Sequence length55-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1670950.014.336748120
TCATTAA570150.010.112279120
ATCATTA643900.09.503784120
GCGTCGG141300.09.383501120
CGTATCA766300.09.3323765120
TCTCGGG42900.09.229995120
GTATCAT737450.09.07104120
CATTAAA544600.08.868151120
TGGTCGC1291950.08.511999120
CCGTATC868750.08.494251120
TATCATT741450.08.407144120
CGCCGTA1005050.08.321276120
GGTCGCC1227750.08.189905120
GTGGTCG1404000.08.178802120
GCCGTAT928900.08.125059120
GTCGCCG1233200.07.856947120
GGTGGTC1495450.07.762898120
ATTAAAA606200.07.699783120
TCGGTGG1714300.07.6747913120
TCGCCGT1149400.07.5058956120
Produced by FastQC (version 0.11.5)