FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830434

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830434
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13860700
Sequences flagged as poor quality0
Sequence length51-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT301700.010.162096120
GTGTAGA427250.09.717662120
TGGTCGC155750.09.399385120
AGTGTAG439050.09.210509120
GAGTGTA475650.09.208165120
AGAGTGT523600.08.972219120
GATCTCG294150.08.7707615120
AGATCTC296700.08.675159120
GTAGATC444350.08.520045120
GGTGGTC190700.08.494754120
CTCGGTG242150.08.349936120
TCTCGGT256050.08.341861120
AAGAGTG589150.08.310019120
TGTAGAT470650.08.06944120
GTGGTCG170400.07.9222884120
TAGGGAA848950.07.8518076120
TCGGTGG231500.07.749219120
CGGTGGT234900.07.71368120
ATCTCGG279000.07.67718118-119
GTGTAGG1026600.07.6151924120
Produced by FastQC (version 0.11.5)