FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830436

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830436
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15285209
Sequences flagged as poor quality0
Sequence length76-126
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG49200.019.634232120
TAGCATG49150.018.5548558
TAACCCC39050.014.596219
AGTGAGT41350.013.4941321
GTGAGTA43700.013.3176562
AACCCTA40550.012.72479586-87
AACCCCC23250.012.25779710-11
ACACTCA49200.010.91577124-25
CACACTC47250.010.47687122-23
ACCCTAT45950.010.31536986-87
TTAACCC48350.010.29977384-85
TAACCCT50850.09.79339384-85
GTGGTCG351300.09.684073120
GGTCGCC301450.09.673287120
TGGTCGC321200.09.508136120
CTACCCC30550.09.32879538-39
CGCCGTA258700.09.300387120
GTCGCCG284700.09.14651120
CCCCCCC12000.08.99971644-45
ACCACTC57700.08.99457542-43
Produced by FastQC (version 0.11.5)