FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830450

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830450
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13693303
Sequences flagged as poor quality0
Sequence length50-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG404450.09.703072120
TGGTCGC365500.09.111753120
GGTCGCC361950.09.002178120
GCGTCGG124200.08.889812120
GGTGGTC444050.08.810734120
CGTATCA244500.08.68802120
GATCTCG712250.08.509132120
ATCTCGG675600.08.420057120
TCGGTGG525300.08.373229120
TAGATCT760700.08.274818120
AGATCTC731200.08.263988120
CGGTGGT502550.08.214961120
GTGTAGA964150.08.053525120
TCTCGGT623600.07.8423796120
CTCGGTG587450.07.824457120
TGTAGAT963500.07.579407120
AGTGTAG1004150.07.577345120
GAGTGTA1073900.07.543385120
AGAGTGT1158800.07.461942120
GTAGATC953850.07.2408843120
Produced by FastQC (version 0.11.5)