FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830452

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830452
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14008464
Sequences flagged as poor quality0
Sequence length67-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1333200.015.068077120
GCGTCGG95150.010.783382120
CGTATCA620700.09.309197120
TCATTAA483000.09.0686655120
ATCATTA552550.08.991382120
GTATCAT612700.08.755023120
CATTAAA463500.08.738194120
GCCGTAT752100.08.592267120
CGCCGTA797000.08.582508120
CCGTATC712400.08.355173120
TGGTCGC1004750.08.169505120
GTGGTCG1087600.08.120939120
TATCATT629250.08.105194120
GTCGCCG935750.08.06015120
GGTCGCC958200.07.952711120
TCTCGGG46700.07.709071120
TCGCCGT891750.07.603316120
GGTGGTC1175100.07.4753914120
ATTAAAA525000.07.2231307120
TCGGTGG1342400.07.1382318120
Produced by FastQC (version 0.11.5)