FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830454

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830454
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14256719
Sequences flagged as poor quality0
Sequence length51-126
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA731150.011.092918120
CGTATCA315350.08.940887120
GTGGTCG576900.08.558052120
TGGTCGC530900.08.5085945120
GTATCAT324650.08.499982120
GGTCGCC528200.08.495301120
TCGGTGG726350.08.300337120
CCGTATC384200.08.291112120
TCATTAA255150.08.111462120
GGTGGTC628550.08.102955120
TCTCGGT821050.07.7375226120
CTCGGTG800900.07.6999946120
ATCTCGG899150.07.685921120
GCCGTAT423100.07.528824120
TATCATT347700.07.4534035120
CGGTGGT701550.07.4222693120
ATCATTA287850.07.398399120
AGATCTC982100.07.3421683120
CGCCGTA469050.07.328432120
TAGATCT1006000.07.32278120
Produced by FastQC (version 0.11.5)