FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830462

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830462
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13337186
Sequences flagged as poor quality0
Sequence length50-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT336650.08.607475120
AGTGTAG454000.08.12693120
GATCTCG346100.08.060438120
GAGTGTA486950.07.995905120
TGGTCGC181600.07.9947853120
AGAGTGT529000.07.972728120
AGATCTC327000.07.963198118-119
ATCTCGG315800.07.7889514120
TCTCGGT284150.07.7064166120
GTGTAGA451950.07.579717120
GTGGTCG205100.07.5760245120
GTAGATC465000.07.5605245120
TCGGTGG260800.07.545248120
GGTGGTC222000.07.3776317120
CTCGGTG274150.07.243476120
TAGGGAA809500.07.1518393120
GCGTCGG80800.07.127991120
TGTAGGG887100.07.0402074120
AAGAGTG584250.06.98322118-119
TGTAGAT481850.06.885263120
Produced by FastQC (version 0.11.5)