FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830480

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830480
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14731602
Sequences flagged as poor quality0
Sequence length57-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA877300.09.8273120
TCATTAA289300.09.083459120
GGTCGCC538750.08.719669120
GCCGTAT460400.08.431299120
CGTATCA354600.08.375139120
TGGTCGC550400.08.360797118-119
GGTGGTC662250.08.352847120
GTATCAT375400.08.342607120
GTGGTCG599950.08.000194120
CCGTATC424050.07.993867120
GTCGCCG571250.07.982022120
CGCCGTA493800.07.946067120
CATTAAA302400.07.8368373120
CGGTGGT744650.07.7347198120
ATCATTA335750.07.5230093120
TCGGTGG766000.07.433069118-119
CTCGGTG834200.07.120173120
GATCTCG980650.07.07856120
ATCTCGG920550.07.0649233120
GCGTCGG96750.07.0073376120
Produced by FastQC (version 0.11.5)