FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830488

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830488
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13903763
Sequences flagged as poor quality0
Sequence length54-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG65900.08.739739120
GGTGGTC265550.08.607783120
AGTGTAG585200.08.345123120
CTCGGTG345850.08.3265705120
TCGGTGG314300.08.207989120
TAGATCT434150.08.042588120
AGATCTC430650.08.024365120
GTGTAGA569050.07.991558120
CGGTGGT308400.07.9564915120
GTGGTCG238400.07.9271483120
ATCTCGG386650.07.9134316120
GTAGATC565100.07.888169120
GAGTGTA631200.07.76547120
TCTCGGT356150.07.7320104120
AGAGTGT692900.07.6194706120
GGTCGCC224350.07.5678587120
GATCTCG423800.07.5028734120
TGGTCGC217600.07.4855623118-119
AAGAGTG759100.07.342254120
TGTAGAT615550.07.017491120
Produced by FastQC (version 0.11.5)