FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830500

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830500
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10241747
Sequences flagged as poor quality0
Sequence length51-126
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1243250.011.060396120
CGTATCA418000.09.142768120
CCGTATC471800.09.1175120
GGTCGCC634300.08.58827120
TGGTCGC671150.08.340203120
CTAGGAA14403.1413947E-98.3340131
GCCGTAT509000.08.3097105120
CGCCGTA536550.08.117849120
GTATCAT420100.08.111669120
TCATTAA386250.08.108052120
GGTGGTC770550.08.050713120
GTGGTCG719800.07.984877120
CGGTGGT838500.07.970704120
TCGCCGT604400.07.9212375120
GTCGCCG628400.07.895578120
GCGTCGG55700.07.7551794120
ATCATTA421700.07.753673120
TCGGTGG896350.07.703929120
CTTGGGT17401.7062121E-97.58682541
CATTAAA393750.07.511747120
Produced by FastQC (version 0.11.5)