FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830512

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830512
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13295180
Sequences flagged as poor quality0
Sequence length73-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG268500.09.457364120
TGGTCGC248450.09.372899120
AGATCTC494450.09.370664120
CTCGGTG380700.09.293866120
TCTCGGT402750.09.02409120
GATCTCG474850.08.959112120
GCGTCGG73000.08.819884120
ATCTCGG441550.08.735346120
TCGGTGG359400.08.706172120
GGTGGTC294100.08.634147120
CGGTGGT347450.08.624601120
TAGATCT519350.08.566078118-119
GAGTGTA756700.08.349636120
AGTGTAG703900.08.146741120
GGTCGCC245100.08.126184120
AGAGTGT819550.08.076426120
GTAGATC678900.07.9238033120
GTGTAGA678600.07.9095716120
TGTAGAT712500.07.8626113120
AAGAGTG899700.07.657901120
Produced by FastQC (version 0.11.5)