FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830520

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830520
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13380246
Sequences flagged as poor quality0
Sequence length54-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG76850.010.148565120
AAAAAAA824150.09.987413120
GGTCGCC457050.09.3196535120
TGGTCGC480000.08.699077120
GTGGTCG521300.08.274587120
CGTATCA322100.08.176717120
GTATCAT354100.08.04772120
GTCGCCG458850.08.001766120
GCCGTAT383200.08.000195120
CGCCGTA394500.07.9079065120
GGTGGTC569000.07.84451120
CCGTATC376600.07.6465597120
TCATTAA274800.07.6192784120
CGGTGGT636400.07.371939120
TCGGTGG658550.07.3608465120
ATCTCGG777200.07.3255215120
CTCGGTG685850.07.225303120
TCGCCGT444650.07.1036835118-119
GATCTCG845600.07.052232120
TCTCGGT719300.06.964366120
Produced by FastQC (version 0.11.5)