FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830522

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830522
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16226916
Sequences flagged as poor quality0
Sequence length57-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGTGG359650.09.491814120
TGGTCGC252400.09.008799120
GGTGGTC301650.08.810842120
GTGGTCG279000.08.70899120
TAGATCT496850.08.609565120
CTCGGTG397750.08.582603120
TCTCGGT407300.08.499207120
GGTCGCC263700.08.486247120
GTGTAGA655800.08.443981120
ATCTCGG450500.08.403333120
GTAGATC643250.08.20767120
AGTGTAG669300.08.040603120
GAGTGTA720100.08.031584120
AGATCTC477800.08.017379118-119
GATCTCG496950.07.955908120
CGGTGGT352400.07.9505644120
AGAGTGT775000.07.950341120
AAGAGTG854800.07.250247120
CGCCGTA261850.07.1943913120
TGTAGAT692150.07.168401120
Produced by FastQC (version 0.11.5)