FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830526

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830526
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16561400
Sequences flagged as poor quality0
Sequence length50-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC351500.08.977935120
GGTGGTC410800.08.339149120
ATCTCGG590100.08.326727120
TCGGTGG492100.08.070877120
CTCGGTG522400.08.027681120
GTGGTCG378850.07.9972405120
GGTCGCC336300.07.920857120
CGGTGGT472050.07.9053016120
TAGATCT689900.07.6787515120
TCTCGGT539550.07.5390053118-119
CGCCGTA305850.07.3755674120
GTCGCCG361400.07.2877326120
AGTGTAG874600.07.2095695120
GCCGTAT300350.07.151077120
AGATCTC689200.07.077198120
GAGTGTA920300.07.027574120
GATCTCG655000.07.0253854120
CGTATCA254550.06.988238118-119
GTGTAGA855100.06.953009120
TCGCCGT362800.06.9123397120
Produced by FastQC (version 0.11.5)