FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830530

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830530
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15438287
Sequences flagged as poor quality0
Sequence length56-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGTAG203400.09.61894120
GAGTGTA221250.09.032783120
TAGATCT153700.08.941743120
TAGGGAA411350.08.899773120
TGTAGGG463350.08.678132120
GTAGGGA425800.08.640033118-119
AAGAGTG297650.08.387799120
CGTGTAG541500.08.345591120
TCGTGTA584850.08.332438120
AGAGTGT254250.08.190853120
CGTCGTG689500.08.068746120
AGCGTCG784950.08.035655120
GTGTAGG511850.07.9730926120
GTAGATC234600.07.802475120
GTGTAGA216900.07.747455120
GTCGTGT613700.07.735367120
GCGTCGT735650.07.5707226120
GAGCGTC854800.07.357959120
AGGGAAA538400.07.27895120
AAGAGCG992800.07.0545564120
Produced by FastQC (version 0.11.5)