FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830544
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14862488
Sequences flagged as poor quality0
Sequence length53-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTCGCC270350.08.587807120
TCGGTGG358300.08.505789120
TGGTCGC256650.08.344967118-119
GGTGGTC303150.08.133584120
CTCGGTG384900.08.105001120
AGATCTC473350.08.098715120
TAGATCT499600.08.093477120
ATCTCGG438550.08.030021120
GTGGTCG281000.07.9420805120
TCTCGGT397700.07.934651120
CGGTGGT353200.07.830291120
GTGTAGA636350.07.7023582120
GATCTCG484250.07.6810355120
AGTGTAG652350.07.577819120
GAGTGTA690950.07.510471120
AGAGTGT743550.07.4229293120
GTAGATC639200.07.161194120
AAGAGTG810050.07.0801716120
CGTATCA171500.07.0312023120
CGCCGTA253550.06.672417120
Produced by FastQC (version 0.11.5)