FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830548

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830548
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13314605
Sequences flagged as poor quality0
Sequence length65-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTC247500.08.048454120
TCGGTGG297950.07.914049120
GGTCGCC206150.07.8292203120
TAGATCT376200.07.7033195120
GTGGTCG221000.07.4931836120
TGGTCGC205300.07.4822955118-119
GTGTAGA491350.07.3755693120
CGGTGGT293400.07.341485120
TCTCGGT331100.07.3029017120
AGATCTC372000.07.241908120
GTCGCCG212150.07.098724120
CTCGGTG320750.07.0714583118-119
AGTGTAG485850.06.9471097118-119
CGCCGTA180650.06.941573120
GATCTCG365150.06.835521120
ATCTCGG344600.06.834523118-119
GTAGATC486150.06.627558120
GAGTGTA518200.06.5886846118-119
AAGAGTG628750.06.355443120
AGAGTGT558450.06.349694120
Produced by FastQC (version 0.11.5)