FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830554

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830554
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14224896
Sequences flagged as poor quality0
Sequence length53-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT347750.09.626315120
GATCTCG324700.09.1456785120
GTAGATC479450.09.096705120
GAGTGTA548250.09.071287120
CTCGGTG271200.09.047459120
AGTGTAG506050.09.045324120
AGATCTC333400.08.943012120
TGGTCGC176600.08.93425120
TCGGTGG253600.08.894707120
TCTCGGT291150.08.880829120
GTGGTCG187400.08.867541120
GTGTAGA501050.08.608766120
CGGTGGT252950.08.585526120
ATCTCGG314900.08.55395120
GGTGGTC204050.08.202772120
AGAGTGT597900.07.9768534118-119
AAGAGTG677950.07.7871413120
GGTCGCC181850.07.686624120
TGTAGAT525550.07.6024437120
GTAGGGA963100.07.4499407120
Produced by FastQC (version 0.11.5)