FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830568

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830568
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14065295
Sequences flagged as poor quality0
Sequence length51-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG84350.013.0962105120
TAGATCT496550.09.237263120
AGATCTC478450.09.109886120
GAGTGTA741100.08.716625120
GTGGTCG273600.08.601672120
ATCTCGG431500.08.570631120
GTGTAGA661600.08.520852120
GATCTCG460400.08.48904120
GGTGGTC305700.08.405456120
AGAGTGT802400.08.402369120
AGTGTAG682900.08.378161120
GTAGATC657000.08.306373120
CTCGGTG388250.08.241925120
TCGGTGG366000.08.004821120
TCTCGGT395400.07.9866014120
AAGAGTG883200.07.973553120
TGGTCGC245650.07.8695884120
GGTCGCC251350.07.452271120
TGTAGAT685250.07.447025120
CGGTGGT361050.07.432811120
Produced by FastQC (version 0.11.5)