FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830580

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830580
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15771372
Sequences flagged as poor quality0
Sequence length66-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG98250.010.892199120
AAAAAAA964550.09.829581120
TGGTCGC541000.08.779261120
GGTGGTC649550.08.367273120
GGTCGCC521050.08.353862120
GTGGTCG592450.08.189359120
CGTATCA359850.08.086339120
GCCGTAT433650.07.860892120
CTCGGTG808350.07.638342120
CGCCGTA454900.07.57298120
GTCGCCG539600.07.554154120
TCGGTGG750100.07.5101485120
CCGTATC423950.07.4025946120
GTATCAT395850.07.3053756120
ATCTCGG902100.07.2444086120
TAGATCT1033150.07.1983743120
CGGTGGT725900.07.1973243120
TCGCCGT520300.07.152616120
AGATCTC995850.07.141985120
TCTCGGT839600.07.0962567120
Produced by FastQC (version 0.11.5)