FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830590

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830590
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15275788
Sequences flagged as poor quality0
Sequence length51-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTC471000.010.510921120
GTGGTCG431800.09.880858120
GCGTCGG110100.09.701533120
GGTCGCC388950.09.503742120
TGGTCGC398100.09.360674120
TCTCGGT661300.09.264775120
CGGTGGT544450.09.114969120
TCGGTGG567950.08.785365118-119
CTCGGTG618350.08.772872120
AGATCTC805000.08.66945120
GATCTCG785800.08.6216345120
ATCTCGG724650.08.545926120
TAGATCT852550.08.368925120
GTGTAGA1089050.08.265157120
GTCGCCG425250.08.24093120
CGTATCA246600.08.078909120
CGCCGTA357650.07.8187146120
AGTGTAG1138850.07.740392120
CCGTATC301200.07.590628120
GTAGATC1037350.07.5606294120
Produced by FastQC (version 0.11.5)