FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830598

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830598
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15674321
Sequences flagged as poor quality0
Sequence length60-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA893050.09.467582120
TGGTCGC513850.08.454853120
GTGGTCG558700.08.377604120
CGTATCA325050.08.10435120
GCGTCGG139150.08.021093120
GGTGGTC597800.07.8095775120
TCGGTGG694900.07.8063855120
GGTCGCC513800.07.8016453120
TCTCGGT781200.07.704466120
GCCGTAT422800.07.6641264120
CTCGGTG755650.07.5917354120
AGATCTC904300.07.5846853120
CCGTATC385300.07.382156120
GATCTCG877500.07.317126120
GTATCAT351050.07.281896120
TAGATCT945600.07.208995120
TCATTAA309900.07.164469120
CGGTGGT668650.07.1615644120
CGCCGTA454500.07.129576120
ATCTCGG838100.07.088409118-119
Produced by FastQC (version 0.11.5)