FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830600

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830600
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16770446
Sequences flagged as poor quality0
Sequence length60-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA892650.010.2260895120
TGGTCGC637100.09.891069120
GGTGGTC758450.09.835711120
GGTCGCC596600.09.526388120
CGTATCA388200.09.476904120
TCGGTGG913000.09.426271120
GCGTCGG104350.09.374685120
GCCGTAT475450.09.366139120
GTGGTCG696800.09.086693120
GTCGCCG609750.08.927236120
CCGTATC456800.08.828862120
CGGTGGT851850.08.665697120
CGCCGTA505000.08.604165120
GTATCAT429750.08.462882120
CTCGGTG982900.08.432297120
TCGCCGT586700.08.377788120
ATCTCGG1130350.08.21901120
TCTCGGT1045200.08.199556120
AGATCTC1289300.07.7596684120
GATCTCG1237650.07.748908120
Produced by FastQC (version 0.11.5)