FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12100059
Sequences flagged as poor quality0
Sequence length51-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1078550.013.9066120
TCATTAA393000.09.8924465120
CGTATCA522650.09.814686120
ATCATTA453000.09.601985120
GTATCAT518600.09.1856365120
GCCGTAT650100.08.997993120
CATTAAA393500.08.934579120
CCGTATC607700.08.835987120
CGCCGTA689800.08.767153120
TATCATT537200.08.487872120
TGGTCGC852150.08.469755120
TCGCCGT766400.08.094431120
GGTCGCC814250.08.0019045120
GTGGTCG922300.07.832051120
GTCGCCG808750.07.729914120
GGTGGTC992450.07.6713934120
CGGTGGT1083950.07.2562914120
ATTAAAA469800.07.0493217120
GCGTCGG83950.07.0036855120
TCGGTGG1134450.06.8515177118-119
Produced by FastQC (version 0.11.5)