FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11263701
Sequences flagged as poor quality0
Sequence length50-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC246400.09.885266120
GCGTCGG73350.09.814862120
TAGATCT527500.09.29186120
GTGGTCG272400.09.1399555120
TCGGTGG361250.09.084112120
GGTGGTC294800.08.994931120
CTCGGTG398250.08.9029665120
ATCTCGG457850.08.870916120
AGATCTC516300.08.6567955120
CGGTGGT343250.08.581713120
GATCTCG504600.08.465172120
GGTCGCC245250.08.390506120
GAGTGTA765000.08.367699120
AGTGTAG708400.08.299474120
TCTCGGT411800.08.289512118-119
GTGTAGA683400.08.269495120
GTAGATC676650.08.077135120
AGAGTGT826000.07.8877444120
TGTAGAT699450.07.668032120
GTCGCCG275000.07.5482535120
Produced by FastQC (version 0.11.5)