FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830628

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830628
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15087483
Sequences flagged as poor quality0
Sequence length61-126
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG48300.012.918923120
GGTCGCC184500.08.617665120
GTGGTCG203500.08.048934120
TAGATCT366050.07.687278120
TGGTCGC188750.07.6611114118-119
ATCTCGG323200.07.6297545120
GATCTCG348750.07.6041064120
CTCGGTG291800.07.587194120
AGTGTAG487750.07.4421463120
AGATCTC363400.07.3801084120
TCGGTGG274900.07.3552136120
GTAGATC477500.07.262641120
TCTCGGT302100.06.9713693118-119
GAGTGTA519550.06.951992120
GTCGCCG192000.06.906073120
GGTGGTC235200.06.81105120
GTGTAGA482500.06.764593120
AGAGTGT565450.06.621105120
TAGGGAA811600.06.6163898120
AAGAGTG624500.06.590704120
Produced by FastQC (version 0.11.5)