FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830630

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830630
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13997043
Sequences flagged as poor quality0
Sequence length53-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT415350.09.838311120
AGTGTAG579450.09.126253120
AGATCTC400950.09.08256120
GCGTCGG91450.08.936779120
GTGGTCG232500.08.81368120
GTGTAGA561350.08.77821120
CTCGGTG327800.08.597847120
TCTCGGT335850.08.588587120
TCGGTGG305300.08.483524120
AAGAGTG751000.08.409857120
ATCTCGG370700.08.364749120
GTAGATC557150.08.35902120
AGAGTGT675050.08.30561120
GATCTCG407700.08.150988120
TGTAGAT581950.08.137039120
GAGTGTA624600.08.122534118-119
GGTGGTC255250.08.09876120
CGGTGGT304500.07.992701120
TGGTCGC212500.07.7484965120
TAGGGAA1077350.07.3125987120
Produced by FastQC (version 0.11.5)