FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830640

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830640
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12855044
Sequences flagged as poor quality0
Sequence length54-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG66900.014.437983120
AAAAAAA1223150.012.718316120
TCTCGGG24950.011.30145120
CGTATCA538400.09.727831120
TGGTCGC887100.09.664211120
GCCGTAT646350.09.300509120
CGCCGTA684550.09.23724120
CCGTATC605250.09.079616120
TCATTAA424900.08.909419120
GTATCAT539600.08.883449120
GGTGGTC1037700.08.857144120
CGGTGGT1146800.08.799239120
TCGGTGG1232150.08.774007120
GTCGCCG802100.08.77357120
GGTCGCC827450.08.773046120
GTGGTCG959050.08.444993120
CTCGGTG1321200.08.409676120
TCGCCGT761050.08.363903120
ATCATTA489600.08.258959120
CATTAAA424050.08.205739120
Produced by FastQC (version 0.11.5)