FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830642

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830642
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12847962
Sequences flagged as poor quality0
Sequence length55-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT282450.010.048734120
GAGTGTA440550.09.548047120
GATCTCG277100.09.528134120
AGATCTC276850.09.471716120
AGTGTAG408500.09.283607120
AAGAGTG550050.09.196386120
AGAGTGT488350.09.1787120
ATCTCGG249800.08.984024120
GTGTAGA397700.08.9171120
TGTAGAT431050.08.797943120
TGGTCGC140750.08.569183120
TCGGTGG217400.08.501253120
TCTCGGT227250.08.423228120
GTGGTCG157050.08.405751120
CTCGGTG218450.08.377984120
TAGGGAA806450.08.28895120
TGTAGGG908300.07.9606676120
GTAGGGA849150.07.9498672120
GCGTCGG75150.07.745233120
GGGAAAG781300.07.7416663120
Produced by FastQC (version 0.11.5)