FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830660

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830660
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15577111
Sequences flagged as poor quality0
Sequence length81-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCTCGG469450.09.114421120
GCGTCGG82100.08.930075120
TAGATCT549550.08.879475120
TGGTCGC273850.08.668077120
TCTCGGT433950.08.41981120
TCGGTGG386650.08.4084835120
CGGTGGT378700.08.346971120
GATCTCG512500.08.325357120
AGATCTC533500.08.144085120
GGTGGTC324750.08.123698120
GAGTGTA779950.07.943837120
CTCGGTG424750.07.8523207120
GTGGTCG289550.07.8037386120
GTGTAGA715350.07.695119120
GGTCGCC271650.07.632166120
AGTGTAG731050.07.5216384120
AGAGTGT843050.07.4918284120
AAGAGTG918850.07.3054504120
GTAGATC696000.07.1041446118-119
CGCCGTA273300.07.036372120
Produced by FastQC (version 0.11.5)