FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830662

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830662
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13892938
Sequences flagged as poor quality0
Sequence length56-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG64450.010.425849120
TGGTCGC154500.09.086648120
GTGGTCG167700.08.764948120
GAGTGTA438300.08.582472120
GGTCGCC151700.08.582039120
TCTCGGT243650.08.396615120
AGTGTAG409050.08.3014965120
GGTGGTC200900.08.272107120
AGAGTGT488200.08.147644120
TAGATCT321150.08.107708120
ATCTCGG267050.07.9304614120
GATCTCG305750.07.7508073120
CTCGGTG240100.07.571236120
GTGTAGA414350.07.52926120
TAGGGAA729750.07.390978120
AGATCTC327500.07.382612120
AAGAGTG538150.07.380248120
GTAGATC449250.07.35834120
TGTAGGG812150.07.10649120
GTAGGGA757800.06.9590597120
Produced by FastQC (version 0.11.5)