FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830663

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830663
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13892938
Sequences flagged as poor quality0
Sequence length50-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCACAC126650.061.287872120
GAGCACA188050.043.960682120
AGAGCAC256400.032.74016120
AAGAGCA424400.020.171255120
GAAGAGC454150.019.792393120
GGAAGAG595500.015.6844425120
TCGGAAG660350.013.665256118-119
CGGAAGA678850.013.626935118-119
ATCGGAA815400.012.175416120
GATCGGA833700.011.82387120
AGATCGG878250.011.245915120
TAGATCG223550.010.716674120
CTAGATC60300.08.79355112-113
AAGATCG420100.08.516062120
GAGATCG321550.07.8677425120
TTAGATC102250.07.560065116-117
CAGATCG325250.07.2184424118-119
CACACGT37400.07.00351120
CCTAGAT25750.05.954393110-111
ATAGATC143100.05.6028314118-119
Produced by FastQC (version 0.11.5)