FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830668

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830668
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11737133
Sequences flagged as poor quality0
Sequence length53-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTC342950.09.551489120
GATCTCG550750.09.411709120
ATCTCGG497800.09.388405120
GTGGTCG309850.09.371371120
TCTCGGT454300.09.283716120
TGGTCGC278700.09.127213120
AGATCTC561050.08.720899118-119
AGTGTAG790850.08.648085120
TAGATCT587500.08.588105120
GCGTCGG77700.08.5706120
TCGGTGG407350.08.542196120
GGTCGCC278850.08.541401120
GAGTGTA847550.08.267739120
GTCGCCG296500.08.174589120
CTCGGTG437900.08.110657120
CGGTGGT391750.08.071243118-119
GTGTAGA761800.07.9777007120
AGAGTGT914500.07.81335120
CGCCGTA236050.07.7518454120
GTAGATC740100.07.5387926120
Produced by FastQC (version 0.11.5)