FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830670

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830670
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13932249
Sequences flagged as poor quality0
Sequence length55-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA610300.010.036489120
TGGTCGC456650.09.537895120
GGTGGTC541800.09.367652120
GTGGTCG498450.09.303734120
CGTATCA271450.08.995057120
TCGGTGG642150.08.49233120
GGTCGCC451350.08.453628120
CTCGGTG700400.08.368505120
CGGTGGT614450.08.240533120
TAGATCT906000.08.204318120
CGCCGTA394950.08.050692120
GCCGTAT360550.08.03676120
ATCTCGG792450.08.017214120
TCTCGGT722500.07.863421120
GTCGCCG499150.07.788312120
GTATCAT284050.07.7512307120
GATCTCG864150.07.733845120
TCGCCGT474500.07.5354548120
AGATCTC873400.07.5282974120
TCATTAA224600.07.479071120
Produced by FastQC (version 0.11.5)