FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830676

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830676
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13785107
Sequences flagged as poor quality0
Sequence length50-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA782950.012.031112120
TGGTCGC627650.09.3584795120
GCGTCGG86950.09.246457120
GGTCGCC604200.09.135814120
GCCGTAT483950.09.112278120
GTATCAT395300.09.030884120
CGCCGTA499550.08.923803120
CGTATCA398650.08.879743120
GTGGTCG682950.08.71491120
GGTGGTC738300.08.4841385120
GTCGCCG598250.08.464472120
TCGCCGT565900.08.237993120
TCATTAA324550.08.226564120
CCGTATC471000.08.038011120
CTCGGTG911400.07.735154120
TCGGTGG861950.07.733429120
CGGTGGT816550.07.5829296120
TCTCGGT967950.07.4816120
CATTAAA319150.07.4257846120
ATCATTA373850.07.221963120
Produced by FastQC (version 0.11.5)