FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830678

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830678
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14156289
Sequences flagged as poor quality0
Sequence length63-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG281250.07.957177120
TGGTCGC260600.07.9430513120
TAGATCT478950.07.879582120
GGTCGCC260850.07.728428120
AGATCTC460750.07.6959963120
GGTGGTC304550.07.683316120
GATCTCG455300.07.5904503120
CTCGGTG395050.07.4723244120
AGTGTAG622350.07.471533120
TCGGTGG361250.07.440684120
GTGTAGA605800.07.35872120
AGAGTGT709400.07.239779120
GTAGATC604850.07.0429296120
GAGTGTA663850.07.0315704120
TCTCGGT404450.07.0167985120
AAGAGTG777300.07.008739120
CGGTGGT353300.06.996749120
ATCTCGG432800.06.9314713120
CGTATCA194550.06.6922355120
GCCGTAT255950.06.633978120
Produced by FastQC (version 0.11.5)