FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830684

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830684
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15623291
Sequences flagged as poor quality0
Sequence length55-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG96950.014.614194120
GGTCGCC566550.09.039023120
GTGGTCG641600.09.0203495120
TGGTCGC593250.08.854846120
GGTGGTC696850.08.74455120
CGTATCA370800.08.726895120
CTCGGTG901150.08.487563120
TCTCGGT963550.08.430129120
CGCCGTA495450.08.409503120
CGGTGGT782800.08.382626120
TCGGTGG819500.08.314911120
GATCTCG1110000.08.269804120
GTCGCCG582200.08.2495165120
CCGTATC434500.08.138347120
GCCGTAT465650.08.122537120
AAAAAAA1151050.08.089623120
ATCTCGG1036350.08.046491120
TCTCGGG34500.08.00478120
AGATCTC1162950.07.8932734120
TAGATCT1218500.07.799488120
Produced by FastQC (version 0.11.5)