FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830700

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830700
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11082540
Sequences flagged as poor quality0
Sequence length126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT197250.010.585942120
GATCTCG174850.010.157651120
AGTGTAG302750.09.691522120
AGATCTC186650.09.483339120
ATCTCGG175550.09.365199120
GTAGATC286000.09.356988120
TGGTCGC94150.09.240914120
CTCGGTG147600.09.187331120
AGAGTGT347200.09.142041120
GTGTAGA287850.08.942487120
AAGAGTG405400.08.850844120
GGTGGTC116850.08.832161120
GAGTGTA322300.08.749934120
TCTCGGT160450.08.67592120
GTGGTCG106700.08.603878120
GCGTCGG38900.08.329355120
TCGGTGG151900.08.176733120
GTAGGGA602800.07.913364120
TGTAGGG641300.07.8406134120
TAGGGAA582500.07.581395120
Produced by FastQC (version 0.11.5)