FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830702

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830702
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11731280
Sequences flagged as poor quality0
Sequence length59-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT371200.09.422505120
TGGTCGC193500.08.743271120
CTCGGTG283000.08.67047120
TCTCGGT302100.08.598902120
GTGGTCG207700.08.49213120
AGTGTAG504800.08.4856415120
GAGTGTA546400.08.454459120
AGATCTC361650.08.393978120
GTGTAGA494750.08.245727120
TCGGTGG270150.07.9947214120
GGTGGTC229100.07.960756120
GCGTCGG67100.07.9574385120
GATCTCG364100.07.909087120
AGAGTGT594200.07.905602120
GTAGATC505650.07.759496120
ATCTCGG330650.07.7028923118-119
TGTAGAT531100.07.681365120
AAGAGTG653250.07.5583367120
CGGTGGT267450.07.200593120
GGTCGCC196750.07.135213120
Produced by FastQC (version 0.11.5)