FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004830706

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004830706
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14708647
Sequences flagged as poor quality0
Sequence length53-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG306550.09.363296120
GATCTCG540750.09.102663120
TAGATCT580900.09.012173120
GGTGGTC336950.08.8935585120
CTCGGTG434350.08.797222120
ATCTCGG501000.08.539719120
TCGGTGG402450.08.522649120
GGTCGCC277300.08.44134120
AGATCTC552250.08.324714120
TGGTCGC280500.08.323587120
GTGTAGA757700.08.28321120
AGTGTAG787650.08.212717120
GAGTGTA843200.08.206896120
GCGTCGG74950.08.108891120
AGAGTGT912250.08.001265120
CGGTGGT386250.07.9765134120
TCTCGGT452800.07.9501376118-119
TGTAGAT793100.07.6555233120
GTAGATC746300.07.5469956120
GTCGCCG300500.07.4492087120
Produced by FastQC (version 0.11.5)